Bioinformatics community: which tools do you use?

I’ve really enjoyed this research article and it’s made me curious to receive feedback from the bioinformatics community, and other research fields:.

  • Which RDF syntax does your community use at large?
  • How easy has it been to get peers to search for and reuse ontologies?
  • Which libraries do you use to compose RDF data?
  • Which SPARQL library are you using?

In these areas, what are your points of pain?
What do you need to make it easier to compose, query, and reuse RDF data?